Honestly, it just really, really needs a basic site whitelist option. Sometimes you don't mind the things this targets because they are actually necessary for functionality. Good example: When I go to my health insurance web portal, a different company handles the online payment. When I click to pay on web portal, it opens their website, and uses a lot of things ClearURLs auto-cleans to tell that payment site who I am without me needing to explicitly log in, and in fact doesn't have a normal log in method for said site, so I have to turn of ClearURLs... to pay online for my health insurance.

This is far from the only situation I've ran into with this.